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Protein Structure

ClustalW at PBIL
Database of Macromolecular Movements
European Molecular Biology Laboratory (EMBL) services
EBI links
- Fasta - search for protein sequences
- Blast - search for protein sequences
- ClustalW - multiple sequence alignment
- PRATT - pattern searching in non-aligned sequences
- Dali/FSSP - fold classification based on protein structure-structure alignment
MODELLER - homology protein structure modelling
SCOP - structural classification of proteins
THREADER - protein tertiary structure prediction
University College London Biochemistry Biocomputing Group
- CATH - protein structural classification
- CATHserver
- PROCHECK - check the stereochemical quality of a protein structure
- Protein-protein Interaction Server - calculate interacting surface areas between molecules